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Thank you so much. I had not supplied the log file. I will update to a nightly build version as well.<BR> <BR>Sincerely<BR>Jay<br> <BR><div><div id="SkyDrivePlaceholder"></div>> From: nechols@lbl.gov<br>> Date: Mon, 3 Dec 2012 22:20:54 -0800<br>> To: phenixbb@phenix-online.org<br>> Subject: Re: [phenixbb] table 1<br>> <br>> On Mon, Dec 3, 2012 at 8:45 PM, So Jay <scjay2012@hotmail.com> wrote:<br>> > I was using generate table 1 utility in phenix-1.8.1-1168. The data was<br>> > processed with HKL2000 and model was refined using Autobuster.<br>> ><br>> > In the table I find two entries for Multiplicity and R-sym were blank.<br>> > I was wondering if there is any particular reason for this.<br>> <br>> In 1.8.1, the program can't calculate multiplicity and R-sym on its<br>> own, only extract these from logfiles. Did you supply the scaling<br>> logfile from HKL2000? The important one is what accompanies your .sca<br>> file (same name but ending in .log). If you did include this, it's<br>> quite possible that the logfile parser breaks somewhere, in which case<br>> I'd be interested in seeing the file.<br>> <br>> That said, I would recommend updating to the latest nightly build,<br>> because the program has been improved significantly, partly just bug<br>> fixes but also the ability to calculate merging statistics directly if<br>> you also supply unmerged data (e.g. obtained using the "no merge<br>> original index" macro for scaling in HKL2000, or output automatically<br>> if you run xia2). This is so much cleaner than parsing logfiles that<br>> the latter feature will probably disappear eventually - it's just too<br>> difficult to support over the long term.<br>> <br>> -Nat<br>> _______________________________________________<br>> phenixbb mailing list<br>> phenixbb@phenix-online.org<br>> http://phenix-online.org/mailman/listinfo/phenixbb<br></div> </div></body>
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