OK. So in my case there was no file created. Is this because there was no good solution or why?<br><br>Ursula<br><br><div class="gmail_quote">On Wed, Jan 30, 2013 at 3:09 PM, Nathaniel Echols <span dir="ltr"><<a href="mailto:nechols@lbl.gov" target="_blank">nechols@lbl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="im">On Wed, Jan 30, 2013 at 2:43 PM, Ursula Schulze-Gahmen<br>
<<a href="mailto:uschulze-gahmen@lbl.gov">uschulze-gahmen@lbl.gov</a>> wrote:<br>
> Has anybody experience with the output from the brute rotation function. I<br>
> ran this and it finished without complaints, but there are no output files<br>
> ***.rlist or ***.sol in the directory. I cannot figure out why and how to<br>
> continue now with the translation function. From the log file it seemed that<br>
> there were peaks that could have been written out.<br>
<br>
</div>In Phenix, all of this info (regardless of what mode you ran Phaser<br>
in) is stored internally in a result object buried in the tracking<br>
directory; there are no additional output files because they're not<br>
needed here. �If you want to continue to the translation function, you<br>
simply select the rotation function job from the "Use previous result"<br>
menu, set the mode to translation function, and it will extract the<br>
angles from there.<br>
<br>
Since this isn't at all obvious (and not at all like CCP4i), I will<br>
see if I can add a note to the results tab to make it clear how to<br>
proceed.<br>
<br>
-Nat<br>
_______________________________________________<br>
phenixbb mailing list<br>
<a href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a><br>
<a href="http://phenix-online.org/mailman/listinfo/phenixbb" target="_blank">http://phenix-online.org/mailman/listinfo/phenixbb</a><br>
</blockquote></div><br><br clear="all"><br>-- <br>Ursula Schulze-Gahmen, Ph.D.<br>Assistant Researcher<br>UC Berkeley, QB3<br>356 Stanley Hall #3220<br>Berkeley, CA 94720-3220<br>