<div dir="ltr">Dear phenixbb,<div><br></div><div>I have carried out refinement using the latest version of PHENIX, which gives improved molprobity stats. However, these stats still do not match those porvided by the molprobity server:</div>
<div><br></div><div><br></div><div> PHENIX output Molprobity server</div><div> Existing H-model Electron-cloud H-model</div>
<div>All atom clashscore 2.57 4.2 (81st perc) 3.25 (88th percentile)</div><div>Rotamer outliers 0.7 1.14 1.14</div>
<div>Overall score 1.04 1/24 (89th perc) 1.16 (93rd percentile)</div><div><br></div><div><br></div><div>Given that PHENIX is now giving me the best results and all scenarios give reasonable results I am less inclined to be concerned. However, I still find these inconsistencies rather puzzling and am curious to learn what is causing them.</div>
<div><br></div><div>Thanks in advance.</div><div><br></div></div>