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<div class="moz-cite-prefix">Hi Joel,<br>
<br>
phenix.maps actually supposed to handle multi-model files provided
that the occupancies are meaningful (equal to 1/N, where N is the
number of models). But honestly I've never tried it with more than
a few (5-10) models..<br>
<br>
Pavel<br>
<br>
<br>
On 7/23/13 8:20 AM, Tom Burnley wrote:<br>
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cite="mid:CAF6Oaw+1mkfJ70s7v__V=xWZgch-ao0uJ6DE9cc5rJrLqDmEzA@mail.gmail.com"
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<div dir="ltr">Hi Joel,
<div><br>
</div>
<div>Short answer is no you need to run the jobs again. However
if they took an age to complete let me know as I have some
scripts that can help reconstruct the maps. Also please could
you email me (off list) the input parameter file you used.
You are correct that the map_type=None likely caused the
crash but I'd like to check that and make it so it intercepts
this issue earlier in the code.</div>
<div><br>
</div>
<div>Cheers,</div>
<div><br>
</div>
<div>Tom</div>
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<div class="gmail_extra"><br>
<br>
<div class="gmail_quote">On 23 July 2013 17:05, Bard, Joel <span
dir="ltr"><<a moz-do-not-send="true"
href="mailto:Joel.Bard@pfizer.com" target="_blank">Joel.Bard@pfizer.com</a>></span>
wrote:<br>
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<p class="MsoNormal">Hi-</p>
<p class="MsoNormal"> </p>
<p class="MsoNormal">I ran phenix.ensemble refinement
which worked very nicely but crashed during map
output. I think this was my fault for using a
parameter file that had map_type = None (I didn’t look
and assumed the default was reasonable). I would like
to calculate maps after the fact. Is there a way to
run the map calculation on the output ensemble pdb
file and reflection data? I tried phenix.maps which
choked on the huge ensemble.
</p>
<p class="MsoNormal"> </p>
<p class="MsoNormal">Thanks,<span class="HOEnZb"></span></p>
<span class="HOEnZb"><font color="#888888">
<p class="MsoNormal"> </p>
<p class="MsoNormal">Joel<br>
</p>
</font></span></div>
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