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Well I never had it :)
<div>Petri</div>
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<div>On 25 Oct 2013, at 21:35, Engin Özkan <<a href="mailto:eozkan@stanford.edu">eozkan@stanford.edu</a>> wrote:</div>
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<div class="moz-cite-prefix">But, no, that problem existed before the Mavericks update (with Snow Leopard and Mountain Lion). I had learned to live with it.<br>
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Engin<br>
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On 10/25/13 1:45 PM, Petri Kursula wrote:<br>
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<blockquote cite="mid:F4FF909F-2E14-4519-B723-3D10D292A418@oulu.fi" type="cite">What I saw were problems with phenix.refine (well-did not try anything else yet). The job seems to start normally (no error messages), but when you check the log file, nothing is
happening (it remains empty or stops at initial steps). If you abort, close Phenix and restart it, the exactly same job runs just fine. I’m starting Phenix GUI from ‘Applications’, not command line.
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<div>Petri</div>
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<div>---</div>
<div>Petri Kursula, PhD</div>
<div>project leader, adjunct professor</div>
<div>Department of Biochemistry & Biocenter Oulu, University of Oulu, Finland</div>
<div>Department of Chemistry, University of Hamburg/DESY, Germany</div>
<div><a moz-do-not-send="true" href="http://www.biochem.oulu.fi/kursula">www.biochem.oulu.fi/kursula</a></div>
<div><a moz-do-not-send="true" href="http://www.desy.de/%7Epetri/research">www.desy.de/~petri/research</a></div>
<div><a moz-do-not-send="true" href="mailto:petri.kursula@oulu.fi">petri.kursula@oulu.fi</a></div>
<div>---</div>
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<div>On 25 Oct 2013, at 17:01, Nathaniel Echols <<a moz-do-not-send="true" href="mailto:nechols@lbl.gov">nechols@lbl.gov</a>> wrote:</div>
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<div dir="ltr">Only the GUI, as far as I know - although apparently there are problems with the version of Python we're currently distributing, but I don't think those will affect most people.
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<div style="">-Nat</div>
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<div class="gmail_quote">On Fri, Oct 25, 2013 at 7:37 AM, Bosch, Juergen <span dir="ltr">
<<a moz-do-not-send="true" href="mailto:jubosch@jhsph.edu" target="_blank">jubosch@jhsph.edu</a>></span> wrote:<br>
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<div style="word-wrap:break-word">is this warning only for the GUI or also the CLI ?
<div>Thanks,</div>
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<div>Jürgen</div>
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<div>On Oct 25, 2013, at 10:22 AM, Nathaniel Echols wrote:</div>
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<div dir="ltr">There is some kind of strange issue with wxPython on the new Mac OS ("Mavericks"), which for at least the 1.8.4 version prevents Phenix application windows (but not the main GUI) from opening. It is also printing out an extraordinary number
of warning messages about fonts to the console. I'm hoping there is a simple solution (which seems likely, since 1.8.2 is mostly okay despite using the same version of wxPython), but until we figure out what is causing this, I recommend leaving your Macs
unmolested if you want to use the Phenix GUI.
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<div>Updates to follow if-and-when I fix this.</div>
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<div>thanks,</div>
<div>Nat</div>
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<div style="word-wrap:break-word">......................<br>
Jürgen Bosch<br>
Johns Hopkins University<br>
Bloomberg School of Public Health<br>
Department of Biochemistry & Molecular Biology<br>
Johns Hopkins Malaria Research Institute<br>
615 North Wolfe Street, W8708<br>
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<a moz-do-not-send="true" href="http://lupo.jhsph.edu/" target="_blank">http://lupo.jhsph.edu</a></div>
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