<div dir="ltr">Rituparna<div><br></div><div>You can find this information in the ener_lib.cif and geostd_ener_lib.cif (changes to the standard Monomer Library values to match the Molprobity values). These files are in $PHENIX/chem_data/mon_lib and $PHENIX/chem_data/geostd respectively.</div>
<div><br></div><div>Cheers</div><div><br></div><div>Nigel</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Fri, Aug 15, 2014 at 10:52 AM, Rituparna Sengupta <span dir="ltr"><<a href="mailto:rsengupta@wisc.edu" target="_blank">rsengupta@wisc.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div>Hi! </div><div><br></div><div>I'm new to the list. This might be a naive question to ask, but I'm looking for information about the set of van der Waal's radii popular with most protein crystallographers. Is there a certain list that phenix uses for building from the x-ray structures. If so, where can I find it. I shall be grateful for any thoughts or inputs on this. </div>
<div><br></div><div>Thanks, </div><div>Ritu</div><div><br></div><div><br></div><br clear="all"><div><div dir="ltr"><span style="color:rgb(0,0,0);font-family:Times;font-size:medium">Rituparna Sengupta</span><div style="min-height:1em;color:rgb(0,0,0);font-family:Times;font-size:medium">
<br><div style="min-height:1em">Graduate Student</div><div style="min-height:1em">Biophysics Graduate Program</div><div style="min-height:1em">Record Lab</div><div style="min-height:1em">Department of Biochemistry</div><div style="min-height:1em">
Biochemical Sciences Building</div><div style="min-height:1em">University of Wisconsin-Madison</div></div></div></div>
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<br></blockquote></div><br><br clear="all"><div><br></div>-- <br>Nigel W. Moriarty<br>Building 64R0246B, Physical Biosciences Division<br>Lawrence Berkeley National Laboratory<br>Berkeley, CA 94720-8235<br>Phone : 510-486-5709 Email : NWMoriarty@LBL.gov<br>
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