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Hi John, additionally<br>
<br>
you can add the following to your ~/.coot.py file:
<br>
<br>
set_auto_read_column_labels("FEM", "PHIFEM", 0)
<br>
<br>
Then Auto-Open will work.
<br>
<br>
The .coot.py is a hidden file and stored in home/myname/ at least in
ubuntu?<br>
<br>
<br>
Georg.<br>
<br>
<br>
<br>
<div class="moz-cite-prefix">On 09/07/2014 09:51 PM, Pavel Afonine
wrote:<br>
</div>
<blockquote cite="mid:540CB739.2050007@lbl.gov" type="cite">
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Hi John,<br>
<br>
it does not open via Auto Open MTZ.<br>
<br>
start Coot then<br>
<br>
File -> Open MTZ, mmCIF, fcf or phs -> the choose FEM,PHIFEM
(there are two Fourier maps in this file : FEM and usual
2mFo-DFc).<br>
<br>
Pavel<br>
<br>
<div class="moz-cite-prefix">On 9/7/14 11:14 AM, Tanner, John J.
wrote:<br>
</div>
<blockquote
cite="mid:B335D1E2-5277-4ED0-A4B9-AB1540CD08FA@missouri.edu"
type="cite">
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
Has anyone had problems reading feature enhanced map mtz files
into coot? I made an FEM on a linux computer with phenix.fem,
which created an mtz file:
<div><br>
</div>
<div>
<div>-rw-r--r-- 1 tannerjj tanner 10760960 Sep 7 12:21
fem.mtz</div>
</div>
<div><br>
</div>
<div>As you can see, the mtz file is not empty. The fem job
appeared to have ended normally, since the last line in the
out file is</div>
<div><br>
</div>
<div>FEM loop: done so far: 100%Time: 3112.3967</div>
<div><br>
</div>
<div>However, when I read this mtz into coot, the map does not
appear. There is no error message from coot. I tried
autoinput mtz and read mtz. I'm using coot on a mac. I have
not tested with coot on Linux.</div>
<div><br>
</div>
<div>Thanks.</div>
<div><br>
</div>
<div>Jack Tanner</div>
<div><br>
</div>
<div><br>
</div>
<br>
<br>
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font-family: Helvetica; font-style: normal; font-variant:
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<div style="word-wrap: break-word; -webkit-nbsp-mode:
space; -webkit-line-break: after-white-space; "> <span
class="Apple-style-span" style="border-collapse:
separate; color: rgb(0, 0, 0); font-family: Helvetica;
font-style: normal; font-variant: normal; font-weight:
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-webkit-text-decorations-in-effect: none;
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<div style="word-wrap: break-word; -webkit-nbsp-mode:
space; -webkit-line-break: after-white-space; "> <span
class="Apple-style-span" style="border-collapse:
separate; color: rgb(0, 0, 0); font-family:
Helvetica; font-style: normal; font-variant:
normal; font-weight: normal; letter-spacing:
normal; line-height: normal; orphans: 2;
text-align: -webkit-auto; text-indent: 0px;
text-transform: none; white-space: normal; widows:
2; word-spacing: 0px;
-webkit-border-horizontal-spacing: 0px;
-webkit-border-vertical-spacing: 0px;
-webkit-text-decorations-in-effect: none;
-webkit-text-size-adjust: auto;
-webkit-text-stroke-width: 0px; font-size: medium;
">
<div style="word-wrap: break-word;
-webkit-nbsp-mode: space; -webkit-line-break:
after-white-space; "> <span
class="Apple-style-span"
style="border-collapse: separate; color:
rgb(0, 0, 0); font-family: Helvetica;
font-style: normal; font-variant: normal;
font-weight: normal; letter-spacing: normal;
line-height: normal; orphans: 2; text-align:
-webkit-auto; text-indent: 0px;
text-transform: none; white-space: normal;
widows: 2; word-spacing: 0px;
-webkit-border-horizontal-spacing: 0px;
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-webkit-text-decorations-in-effect: none;
-webkit-text-size-adjust: auto;
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medium; ">
<div style="word-wrap: break-word;
-webkit-nbsp-mode: space;
-webkit-line-break: after-white-space; ">
John J. Tanner, PhD<br>
Professor of Biochemistry and Director of
Graduate Admissions and Recruitment</div>
<div style="word-wrap: break-word;
-webkit-nbsp-mode: space;
-webkit-line-break: after-white-space; ">
Professor of Chemistry (Joint Appointment)</div>
<div style="word-wrap: break-word;
-webkit-nbsp-mode: space;
-webkit-line-break: after-white-space; ">
University of Missouri-Columbia<br>
125 Chemistry Building<br>
Columbia, MO 65211<br>
email: <a moz-do-not-send="true"
href="mailto:tannerjj@missouri.edu">tannerjj@missouri.edu</a><br>
phone: 573-884-1280<br>
fax: 573-882-2754<br>
<a moz-do-not-send="true"
href="http://faculty.missouri.edu/%7Etannerjj/tannergroup/tanner.html">http://faculty.missouri.edu/~tannerjj/tannergroup/tanner.html</a><br>
<br>
<br>
</div>
</span></div>
</span></div>
</span></div>
</span></span></div>
<br>
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<pre class="moz-signature" cols="72">--
Mlynek Georg
University of Vienna
Department of Computational and Structural Biology Max F. Perutz Laboratories
Campus Vienna Biocenter 5 level -2
1030 Vienna Austria
e-mail: <a class="moz-txt-link-abbreviated" href="mailto:georg.mlynek@univie.ac.at">georg.mlynek@univie.ac.at</a>
mobil: +43 660 42 195 07
office: +43-1-4277-52263</pre>
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