<div dir="ltr"><div><div><div><div>Hi Smith,<br><br></div>PHENIX uses muscle (<a href="http://www.drive5.com/muscle/">http://www.drive5.com/muscle/</a>) to align sequences (<a href="https://www.phenix-online.org/documentation/phenix_gui.html#other-tools">https://www.phenix-online.org/documentation/phenix_gui.html#other-tools</a>).<br><br></div>You can access muscle with "phenix.muscle" on the command line.<br><br></div>Hope this helps,<br></div>Folmer Fredslund<br></div><div class="gmail_extra"><br><div class="gmail_quote">2015-04-10 9:20 GMT+02:00 Smith Liu <span dir="ltr"><<a href="mailto:smith_liu123@163.com" target="_blank">smith_liu123@163.com</a>></span>:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="line-height:1.7;color:#000000;font-size:14px;font-family:Arial"><div>Dear All,</div><div> </div><div>Will you please tell me the Phenix command to align the PDB sequence and input sequence?</div><div> </div><div>I am looking forward to getting your reply.</div><span class="HOEnZb"><font color="#888888"><div> </div><div>Smith</div></font></span></div><br><br><span title="neteasefooter"><span></span></span><br>_______________________________________________<br>
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