<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Dear Tom,<div class=""><br class=""></div><div class="">I found in the phenixbb exactly my case discribed as you wrote on July 22nd, 2013 on reply of <span style="background-color: rgb(255, 255, 255);" class="">Morten Grøftehauge:</span><div class=""><span style="background-color: rgb(255, 255, 255);" class=""><br class=""></span></div><div class=""><pre style="background-color: rgb(255, 255, 255);" class="">Hi Morten,
Yes, you'll need to specify the start_point (otherwise it will start from the beginning considering the solutions you have in the .pkl file along with ones that it finds along the way).
I don't know if rosetta3.5 makes a difference in mr_rosetta; I'd be happy to hear from anyone on this.
All the best,
Tom T</pre><div class="">but unfortunately after launching the command "<font face="Menlo" class="">phenix.mr_rosetta mr_rosetta_params.eff start_point=rosetta_rescore mr_rosetta_solutions=./rebuild_results.pkl"</font> I get the following error message:</div><div class=""><br class=""></div><div class=""><pre style="background-color: rgb(255, 255, 255);" class="">Sorry: Unable to create temporary directory MR_ROSETTA_3</pre><pre style="background-color: rgb(255, 255, 255);" class="">Error message is: The directory MR_ROSETTA_3 could not be created (it may already exist)</pre></div><div class="">but this looks not logical to me since I am in directory MR_ROSETTA_3 because I want to restart were the program stopped after the crash. Do I have to restart the program from within another directory or what ist the trick? I must admit I first started without the <span style="font-family: Menlo;" class="">start_point=rosetta_rescore </span>until I realized the program had started my job from the very beginning. Thus i killed the processes again and tried the above with the start_point included. Has my previous attempt already confused something?</div><div apple-content-edited="true" class="">
<span class="Apple-style-span" style="border-collapse: separate; border-spacing: 0px;"><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; " class="">__________________________________<br class="">Dr. Juergen Koepke<br class="">Project Leader ESFRI-Instruct Core Centre<br class="">Max-Planck-Inst. of Biophysics<br class="">Dept. Molecular Membrane Biol.<br class="">Max-von-Laue Str. 3<br class="">D-60438 Frankfurt/Main<br class="">Germany<br class=""><br class="">T: [49] 69 6303 1055<br class="">F: [49] 69 6303 1002<br class="">C: [49] 151 2263 6736<br class="">Email: <a href="mailto:juergen.koepke@biophys.mpg.de" class="">juergen.koepke@biophys.mpg.de</a><br class="">URL: <a href="https://registration.cc.biophys.mpg.de" class="">https://registration.cc.biophys.mpg.de</a></div></span></span>
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