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Dear Billy and Nigel,<br>
<br>
Thank you. Phenix.refine GUI in the latest nightly/release candidate
no longer has the master enable/disable button, and so the problem
is resolved.<br>
<br>
Engin<br>
<br>
<div class="moz-cite-prefix">On 8/13/15 11:28 AM, Billy Poon wrote:<br>
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cite="mid:CAHmYUcaA52ECmXdnWogkD-Om2vbSh=Ff2AyUvFJoE9CR0fE9Wg@mail.gmail.com"
type="cite">
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<div dir="ltr">Hi Engin,
<div><br>
</div>
<div>Thanks! We updated that part of the GUI so that it should
be more intuitive. There is now a button that lets you apply
automatic linking to all the components and a button that
disables all automatic linking. You can, of course, still pick
which components to enable by checking the specific boxes.</div>
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<div class="gmail_extra"><br>
<div class="gmail_quote">On Tue, Aug 11, 2015 at 7:40 AM, Engin
Özkan <span dir="ltr"><<a moz-do-not-send="true"
href="mailto:eozkan@uchicago.edu" target="_blank">eozkan@uchicago.edu</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">Dear
Developers,<br>
<br>
Using the latest phenix nightly, I observed something odd in
the phenix.refine UI, and I thought I should report it. If
one unchecks Automatic ligand linking, this seems to not
override its options, as the instructions in the Options
window suggest. Specifically, if "Automatic Ligand Linking"
is unchecked, but the "Link metals" is checked within its
Options window, metal link restraints are still created.<br>
<br>
I checked the .geo file to confirm this.<br>
<br>
Thanks,<br>
Engin<br>
<br>
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