<div dir="ltr">Jens<div><br></div><div>You have a choice. You can find (if it's there) an Chemical Component entry that has the phosphate as part of the 3-letter code or you can find the phosphate moiety as a separate residue. In Phenix 1.10, this will be automatically linked and the LINK record written to the PDB output. </div><div><br></div><div>I can help if you desire.</div></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature"><div dir="ltr"><div><div dir="ltr">Cheers<div><br></div><div>Nigel<div><br></div><div>---</div><div>Nigel W. Moriarty<br>Building 33R0349, Physical Biosciences Division<br>Lawrence Berkeley National Laboratory<br>Berkeley, CA 94720-8235<br>Phone : 510-486-5709 Email : NWMoriarty@LBL.gov<br>Fax : 510-486-5909 Web : <a href="http://CCI.LBL.gov" target="_blank">CCI.LBL.gov</a></div></div></div></div></div></div></div>
<br><div class="gmail_quote">On Mon, Sep 21, 2015 at 9:34 AM, jens j birktoft <span dir="ltr"><<a href="mailto:birktoft@nyu.edu" target="_blank">birktoft@nyu.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi everyone <div>I need some suggestions for a CIF file for a 5'-phosphate moiety that is part of the nucleotide (CYT in this case) located at the start of a DNA strand (5' end) to be used in refinement in both PHENIX and COOT. </div><div>All suggestions are appreciated. </div><div>Cheers</div><span class="HOEnZb"><font color="#888888"><div>Jens</div><div><br clear="all"><div><br></div>-- <br><div><div>+++++++++++++++++++++++++++++++++++++++++++++++++++<br>Jens J. <span style="background-color:yellow">Birktoft</span></div><div>Structural DNA Nanotechnology<br></div><div>New York University</div><div>e-mail: <a href="mailto:jens.knold@gmail.com" target="_blank"><span style="background-color:yellow">birktoft</span>@nyu.edu</a>; Phone: <a href="tel:212-749-5057" value="+12127495057" target="_blank">212-749-5057</a><br>very slow-mail: 350 Central Park West, Suite 9F, New York, NY 10025<br>+++++++++++++++++++++++++++++++++++++++++++++++++++</div></div>
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