<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">
<style type="text/css" style="display:none"><!-- p { margin-top: 0px; margin-bottom: 0px; }--></style>
</head>
<body dir="ltr" style="font-size:12pt;color:#000000;background-color:#FFFFFF;font-family:Calibri,Arial,Helvetica,sans-serif;">
<p>​Hi Ashok,<br>
</p>
<p>If you have a PDB file with 2 crystallographically-related copies of your molecule, with one called chain A and one called chain B, you can run phenix.simple_ncs_from_pdb on your PDB file to find the matrices and translations. Let me know if that doesn't
do it!<br>
</p>
<p>All the best,<br>
</p>
<p>Tom T<br>
</p>
<p><br>
</p>
<div style="color: rgb(33, 33, 33);">
<hr tabindex="-1" style="display:inline-block; width:98%">
<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> phenixbb-bounces@phenix-online.org <phenixbb-bounces@phenix-online.org> on behalf of Ashok Nayak <ashokgocrackin@gmail.com><br>
<b>Sent:</b> Wednesday, November 18, 2015 7:58 AM<br>
<b>To:</b> phenixbb@phenix-online.org<br>
<b>Subject:</b> [phenixbb] (no subject)</font>
<div> </div>
</div>
<div>
<div dir="ltr">
<div>
<div>Hello Phenix BB,<br>
</div>
Like every amateur crystallographer I could easily generate symmetry mates in a given radius in coot, but I wondered always which is the crystallographic two fold axis axis(my space group being C2) through which the molecule is rotated and translated (if it
is) to get the next molecule. I tried superpose to find the answer, but could only get the Euler angles and transformation matrix and not the axis. Are there any programs where I can get to know this, would be grateful to be enlightened for the same<br>
<br>
</div>
thanks BB in advance<br>
<br>
<div><br>
<br>
<div>regards<br clear="all">
</div>
<div>
<div>
<div><br>
-- <br>
<div class="gmail_signature">
<div dir="ltr"><font face="courier new, monospace"><font size="2">Ashok<u> </u></font>Nayak<br>
PhD student- <br>
Molecular and Structural Biology Division <br>
CSIR-CDRI, Janakipuram Extension<br>
Lucknow-226031<br>
India</font></div>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</div>
</body>
</html>