<div dir="ltr">Just to answer Pavel, the only reading of LINK records is done by an obsolete script for converting them to .edits.</div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature"><div dir="ltr"><div><div dir="ltr">Cheers<div><br></div><div>Nigel<div><br></div><div>---</div><div>Nigel W. Moriarty<br>Building 33R0349, Physical Biosciences Division<br>Lawrence Berkeley National Laboratory<br>Berkeley, CA 94720-8235<br>Phone : 510-486-5709 Email : NWMoriarty@LBL.gov<br>Fax : 510-486-5909 Web : <a href="http://CCI.LBL.gov" target="_blank">CCI.LBL.gov</a></div></div></div></div></div></div></div>
<br><div class="gmail_quote">On Thu, Feb 18, 2016 at 6:26 PM, Pavel Afonine <span dir="ltr"><<a href="mailto:pafonine@lbl.gov" target="_blank">pafonine@lbl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><span class=""><br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
phenix.refine does not use REMARKS.<br>
</blockquote>
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Actually it uses some information from REMARK records (if it finds it and validates it is good, otherwise continues), such as TLS selections, twin operator, perhaps something else which I forgot.<br>
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Recently it started outputting LINK records for internally generated extra restraints, such as metal coordination or ligand linking. I can't remember if we read them back and if we do what happens if LINK defines nonexistent (obsolete) atoms.<span class="HOEnZb"><font color="#888888"><br>
<br>
Pavel</font></span><div class="HOEnZb"><div class="h5"><br>
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