<div style="line-height:1.7;color:#000000;font-size:14px;font-family:Arial"><div>Thank you Pavel! <span style="line-height: 1.7;">It works.</span></div><div><span style="line-height: 1.7;"><br></span></div><div><span style="line-height: 1.7;">Lu</span></div><br><br><div style="position:relative;zoom:1">--<br><div style="color: rgb(51, 51, 51); font-family: 'Microsoft Yahei', verdana; font-size: 12px; line-height: 19.992000579834px;">卢作焜</div><div style="color: rgb(51, 51, 51); font-family: 'Microsoft Yahei', verdana; font-size: 12px; line-height: 19.992000579834px;">南开大学新生物站A202</div><div style="color: rgb(51, 51, 51); font-family: 'Microsoft Yahei', verdana; font-size: 12px; line-height: 19.992000579834px;"><br></div><div style="color: rgb(51, 51, 51); font-family: 'Microsoft Yahei', verdana; font-size: 12px; line-height: 19.992000579834px;">Lu Zuokun, Ph.D. Candidate</div><div style="color: rgb(51, 51, 51); font-family: 'Microsoft Yahei', verdana; font-size: 12px; line-height: 19.992000579834px;">College of Life Science, Nankai University</div><div style="clear:both"></div></div><div id="divNeteaseMailCard"></div><br>在 2016-03-18 23:22:02,"Pavel Afonine" <pafonine@lbl.gov> 写道:<br> <blockquote id="isReplyContent" style="PADDING-LEFT: 1ex; MARGIN: 0px 0px 0px 0.8ex; BORDER-LEFT: #ccc 1px solid">
Hi Lu,<br>
<br>
the page your refer to is obsolete (clearly we should rid it!).
Please use <br>
<br>
<a class="moz-txt-link-freetext" href="https://www.phenix-online.org/documentation/reference/pdbtools.html">https://www.phenix-online.org/documentation/reference/pdbtools.html</a><br>
<br>
which tells that you can achieve what you want by doing this:<br>
<br>
phenix.pdbtools model.pdb model_statistics=true<br>
<br>
Pavel<br>
<br>
<div class="moz-cite-prefix">On 3/18/16 03:46, luzuok wrote:<br>
</div>
<blockquote cite="mid:321bbd6a.ed71.15389559ff4.Coremail.luzuokun@126.com" type="cite">
<div style="line-height:1.7;color:#000000;font-size:14px;font-family:Arial">
<div>Dear developers,<br>
<br>
Following <br>
<a moz-do-not-send="true" _src="http://www.phenix-online.org/download/documentation/cci_apps/pdbtools.html" href="http://www.phenix-online.org/download/documentation/cci_apps/pdbtools.html">http://www.phenix-online.org/download/documentation/cci_apps/pdbtools.html</a><br>
When typing<br>
phenix.pdbtools Mymodel.pdb --show-adp-statistics<br>
I got the following error:<br>
pdbtools.py: error: no such option: --show-adp-statistics<br>
<br>
Does this option belong to old version of pdbtools? <br>
My Phenix version is 1.10.<br>
<br>
Best wishes!<br>
Lu<br>
<br>
</div>
<br>
<br>
<br>
<br>
<div style="position:relative;zoom:1">--<br>
<div style="color: rgb(51, 51, 51); font-family: 'Microsoft
Yahei', verdana; font-size: 12px; line-height:
19.992000579834px;">卢作焜</div>
<div style="color: rgb(51, 51, 51); font-family: 'Microsoft
Yahei', verdana; font-size: 12px; line-height:
19.992000579834px;">南开大学新生物站A202</div>
<div style="color: rgb(51, 51, 51); font-family: 'Microsoft
Yahei', verdana; font-size: 12px; line-height:
19.992000579834px;"><br>
</div>
<div style="color: rgb(51, 51, 51); font-family: 'Microsoft
Yahei', verdana; font-size: 12px; line-height:
19.992000579834px;">Lu Zuokun, Ph.D. Candidate</div>
<div style="color: rgb(51, 51, 51); font-family: 'Microsoft
Yahei', verdana; font-size: 12px; line-height:
19.992000579834px;">College of Life Science, Nankai
University</div>
</div>
</div>
<br>
<br>
<span title="neteasefooter">
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</span><br>
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