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<p>Hi,<br>
</p>
<p><br>
</p>
<p>Typing locale generates:<br>
</p>
<p>LANG=en_US.UTF-8<br>
</p>
<p>...<br>
</p>
<p>LC_ALL=<br>
</p>
<p><br>
</p>
<p>Running<br>
</p>
<pre class="lang-bsh prettyprint prettyprinted" style="margin-top: 0px; margin-bottom: 1em; padding: 5px; border: 0px; font-size: 13px; width: auto; max-height: 600px; overflow: auto; font-family: Consolas, Menlo, Monaco, "Lucida Console", "Liberation Mono", "DejaVu Sans Mono", "Bitstream Vera Sans Mono", "Courier New", monospace, sans-serif; background-color: rgb(239, 240, 241); color: rgb(57, 51, 24); word-wrap: normal;"><code style="margin: 0px; padding: 0px; border: 0px; font-family: Consolas, Menlo, Monaco, "Lucida Console", "Liberation Mono", "DejaVu Sans Mono", "Bitstream Vera Sans Mono", "Courier New", monospace, sans-serif; white-space: inherit;"><span class="pln" style="margin: 0px; padding: 0px; border: 0px; color: rgb(48, 51, 54);">sudo locale</span><span class="pun" style="margin: 0px; padding: 0px; border: 0px; color: rgb(48, 51, 54);">-</span><span class="pln" style="margin: 0px; padding: 0px; border: 0px; color: rgb(48, 51, 54);">gen </span><span class="str" style="margin: 0px; padding: 0px; border: 0px; color: rgb(125, 39, 39);">"en_US.UTF-8"</span></code><br></pre>
<p>does not change anything<br>
</p>
<p><br>
</p>
<p>modifying <span style="color: rgb(17, 17, 17); font-family: Consolas, Menlo, Monaco, "Lucida Console", "Liberation Mono", "DejaVu Sans Mono", "Bitstream Vera Sans Mono", "Courier New", monospace, sans-serif; font-size: 13px; white-space: pre-wrap; background-color: rgb(239, 240, 241);">/etc/environment</span>
to include<br>
</p>
<pre style="margin-top: 0px; margin-bottom: 1em; padding: 5px; border: 0px; font-size: 13px; width: auto; max-height: 600px; overflow: auto; font-family: Consolas, Menlo, Monaco, "Lucida Console", "Liberation Mono", "DejaVu Sans Mono", "Bitstream Vera Sans Mono", "Courier New", monospace, sans-serif; background-color: rgb(239, 240, 241); word-wrap: normal; color: rgb(17, 17, 17);"><code style="margin: 0px; padding: 0px; border: 0px; font-family: Consolas, Menlo, Monaco, "Lucida Console", "Liberation Mono", "DejaVu Sans Mono", "Bitstream Vera Sans Mono", "Courier New", monospace, sans-serif; white-space: inherit;">LC_ALL=en_US.UTF-8
LANG=en_US.UTF-8</code>​<br></pre>
<p>Then Running locale indicates that LC_ALL=en_US.UTF-8. However, the problem persists. <br>
</p>
<p><br>
</p>
<p>Reza<br>
</p>
<p><br>
</p>
<p><br>
</p>
<div id="Signature">
<div name="divtagdefaultwrapper" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:; margin:0">
Reza Khayat, PhD
<div>Assistant Professor </div>
<div>City College of New York</div>
<div>Department of Chemistry</div>
<div>New York, NY 10031</div>
</div>
</div>
<div style="color: rgb(33, 33, 33);">
<hr tabindex="-1" style="display:inline-block; width:98%">
<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Billy Poon <bkpoon@lbl.gov><br>
<b>Sent:</b> Tuesday, November 22, 2016 4:57 PM<br>
<b>To:</b> Reza Khayat<br>
<b>Cc:</b> phenixbb@phenix-online.org<br>
<b>Subject:</b> Re: [phenixbb] Crashing Phenix</font>
<div> </div>
</div>
<div>
<div dir="ltr">Hi Reza,
<div><br>
</div>
<div>Do you have the LANG or LC_ALL environment variables set? If you have LANG can you try setting LC_ALL to the same value? Also, make sure that there is a "UTF-8" somewhere. So for English (U.S.), LC_ALL should be set to en_US.UTF-8.</div>
</div>
<div class="gmail_extra"><br clear="all">
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<div>
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<div dir="ltr">
<div>
<div>--</div>
<div><span style="font-size:12.8000001907349px">Billy K. Poon</span><br>
</div>
</div>
<div>Research Scientist, Molecular Biophysics and Integrated Bioimaging</div>
<div>Lawrence Berkeley National Laboratory</div>
<div>1 Cyclotron Road, M/S 33R0345</div>
<div>Berkeley, CA 94720</div>
<div>Tel: (510) 486-5709</div>
<div>Fax: (510) 486-5909</div>
<div>Web: <a href="https://phenix-online.org" target="_blank">https://phenix-online.org</a></div>
</div>
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<br>
<div class="gmail_quote">On Tue, Nov 22, 2016 at 3:38 PM, Reza Khayat <span dir="ltr">
<<a href="mailto:rkhayat@ccny.cuny.edu" target="_blank">rkhayat@ccny.cuny.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex; border-left:1px #ccc solid; padding-left:1ex">
<div dir="ltr" style="font-size:12pt; color:#000000; background-color:#ffffff; font-family:Calibri,Arial,Helvetica,sans-serif">
<p>Hi,</p>
<p><br>
</p>
<p>I recently installed phenix-1.11.1-2575 (CentOS 5 flavor) and am getting the following crashes when trying to launch the GUI.<br>
</p>
<p>15:31:23: Cannot set locale to language "English".<br>
15:31:23: locale 'en_GB' cannot be set.<br>
<br>
</p>
<p>phenix-1.10.1-2155 (on the same system) also gives me a locale 'en_GB' error but the GUI launches and I can run programs.</p>
<p><br>
</p>
<p>Any suggestions on how to fix this problem? Thanks.</p>
<p><br>
</p>
<p>Best wishes,<br>
Reza</p>
<div id="m_486986284685556905Signature">
<div name="divtagdefaultwrapper"><br>
Reza Khayat, PhD
<div>Assistant Professor </div>
<div>City College of New York</div>
<div>Department of Chemistry</div>
<div>New York, NY 10031</div>
</div>
</div>
<div style="color:rgb(33,33,33)">
<hr style="display:inline-block; width:98%">
<div id="m_486986284685556905divRplyFwdMsg" dir="ltr"><font color="#000000" face="Calibri, sans-serif" style="font-size:11pt"><b>From:</b>
<a href="mailto:phenixbb-bounces@phenix-online.org" target="_blank">phenixbb-bounces@phenix-<wbr>online.org</a> <<a href="mailto:phenixbb-bounces@phenix-online.org" target="_blank">phenixbb-bounces@phenix-<wbr>online.org</a>> on behalf of Pavel Afonine <<a href="mailto:pafonine@lbl.gov" target="_blank">pafonine@lbl.gov</a>><br>
<b>Sent:</b> Wednesday, August 3, 2016 7:39 AM<br>
<b>To:</b> <a href="mailto:phenixbb@phenix-online.org" target="_blank">phenixbb@phenix-online.org</a><br>
<b>Subject:</b> Re: [phenixbb] Realspace refinement</font>
<div> </div>
</div>
<div>
<p>Hi Reza,<br>
</p>
yes, it does.<br>
<br>
Pavel<br>
<br>
<div class="m_486986284685556905moz-cite-prefix">On 8/1/16 04:16, Reza Khayat wrote:<br>
</div>
<blockquote type="cite">
<div class="m_486986284685556905WordSection1">
<p class="MsoNormal">Hi,</p>
<p class="MsoNormal"> </p>
<p class="MsoNormal">Does realspace refinement consider temperature factors during refinement? Thanks.</p>
<p class="MsoNormal"> </p>
<p class="MsoNormal">Best wishes,<br>
Reza</p>
<p class="MsoNormal"> </p>
<p class="MsoNormal"><span style="color:#1f497d">Reza Khayat, PhD</span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d">Assistant Professor</span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d">Department of Chemistry</span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d">City College of New York</span></p>
<p class="MsoNormal"><span style="color:#1f497d">85 Saint Nicholas Terrace, CDI 2.318</span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d">New York, NY 10031</span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d"><a href="http://www.khayatlab.org/" target="_blank"><span style="color:#0563c1">http://www.khayatlab.org/</span></a></span><span style="color:#212121"></span></p>
<p class="MsoNormal"><span style="color:#1f497d"><a href="tel:212-650-6070" value="+12126506070" target="_blank">212-650-6070</a></span><span style="color:#212121"></span></p>
<p class="MsoNormal"> </p>
</div>
<br>
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