<div dir="auto">No.</div><div class="gmail_extra"><br><div class="gmail_quote">On Jan 11, 2017 11:19 PM, "Ashraya Ravikumar" <<a href="mailto:ashrayar@gmail.com">ashrayar@gmail.com</a>> wrote:<br type="attribution"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div>Hi Pavel,<br><br></div>Thanks a lot for your help. I have one question though. I noticed that all the measures have been sorted by residual. Is there a way to order them based on the residue number?<br><br><br><br></div>Regards,<br></div>Ashraya<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Jan 12, 2017 at 12:10 PM, Pavel Afonine <span dir="ltr"><<a href="mailto:pafonine@lbl.gov" target="_blank">pafonine@lbl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Ashraya,<span><br>
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I would like to calculate all the bond lengths, bond angles and main chain torsion angles for a large set of proteins, in PDB format. Could you please let me know which module/command in phenix is suitable for this task?<br>
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phenix.pdb_interpretation model.pdb write_geo_files=true<br>
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this will write a file with full list of bond/angle/plane/torsion/etc definitions for the model you provide.<br>
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Let me know if you have any questions.<span class="m_-1312305901911188051HOEnZb"><font color="#888888"><br>
<br>
Pavel<br>
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