<div dir="ltr"><div><div>Thanks Tristan,<br><br></div>I had a few failed jobs in my "job history" tab that were still marked as running. I deleted them and now ERRASER works again. So hopefully that was (somehow) the issue.<br><br></div>-Eric<br><br><br></div><div class="gmail_extra"><br><div class="gmail_quote">On Fri, May 12, 2017 at 2:59 PM, Tristan Croll <span dir="ltr"><<a href="mailto:tic20@cam.ac.uk" target="_blank">tic20@cam.ac.uk</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">This would appear to be related to a long-standing bug in Python 2.7: see <a href="https://bugs.python.org/issue9400" rel="noreferrer" target="_blank">https://bugs.python.org/issue9<wbr>400</a>. Whatever the *actual* error is is being obscured by the fact that the error doesn't get properly handed back from the sub-process. Looks like it might be somewhat non-trivial to get to the bottom of.<div><div class="h5"><br>
<br>
On 2017-05-12 18:13, Eric Montemayor wrote:<br>
</div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5">
Has anybody encountered this error when running ERRASER in Phenix? If<br>
so, any suggestions for how to fix this would be greatly appreciated!<br>
<br>
------------------------------<wbr>------------------------------<wbr>--------------<br>
<br>
TypeError : ('__init__() takes at least 3 arguments (1 given)', <class<br>
'subprocess.CalledProcessError<wbr>'>, ())<br>
<br>
Traceback (most recent call last):<br>
File<br>
"/opt/sbgrid/i386-mac/phenix/1<wbr>.11.1-2575/phenix-1.11.1-2575/<wbr>modules/phenix/wxGUI2/App.py",<br>
line 784, in OnTimer<br>
self.run_manager.update(update<wbr>_backgrounded=False)<br>
File<br>
"/opt/sbgrid/i386-mac/phenix/1<wbr>.11.1-2575/phenix-1.11.1-2575/<wbr>modules/phenix/wxGUI2/ProcessC<wbr>ontrol.py",<br>
line 213, in update<br>
process.update()<br>
File<br>
"/opt/sbgrid/i386-mac/phenix/1<wbr>.11.1-2575/phenix-1.11.1-2575/<wbr>modules/phenix/wxGUI2/ProcessC<wbr>ontrol.py",<br>
line 136, in update<br>
self._process.update()<br>
File<br>
"/opt/sbgrid/i386-mac/phenix/1<wbr>.11.1-2575/phenix-1.11.1-2575/<wbr>modules/cctbx_project/libtbx/<wbr>runtime_utils.py",<br>
line 306, in update<br>
(error, traceback_info) = easy_pickle.load(self.error_fi<wbr>le)<br>
File<br>
"/opt/sbgrid/i386-mac/phenix/1<wbr>.11.1-2575/phenix-1.11.1-2575/<wbr>modules/cctbx_project/libtbx/<wbr>easy_pickle.py",<br>
line 82, in load<br>
return cPickle.loads(_open(file_name, "rb").read())<br>
TypeError: ('__init__() takes at least 3 arguments (1 given)', <class<br>
'subprocess.CalledProcessError<wbr>'>, ())<br>
<br>
------------------------------<wbr>------------------------------<wbr>--------------<br>
<br>
--<br>
<br>
Eric J. Montemayor, Ph.D.<br>
Associate Scientist<br>
University of Wisconsin-Madison<br>
145 Biochemistry Laboratories<br>
433 Babcock Drive<br>
Madison, WI 53706<br>
<a href="tel:512.784.5981" value="+15127845981" target="_blank">512.784.5981</a><br>
</div></div><a href="http://about.me/montemayor" rel="noreferrer" target="_blank">http://about.me/montemayor</a> [1]<br>
<a href="https://www.linkedin.com/in/ericmontemayor" rel="noreferrer" target="_blank">https://www.linkedin.com/in/er<wbr>icmontemayor</a> [2]<br>
<br>
<br>
Links:<br>
------<br>
[1] <a href="http://about.me/montemayor" rel="noreferrer" target="_blank">http://about.me/montemayor</a><br>
[2] <a href="https://www.linkedin.com/pub/eric-montemayor/63/121/98b" rel="noreferrer" target="_blank">https://www.linkedin.com/pub/e<wbr>ric-montemayor/63/121/98b</a><br>
<br>
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</blockquote>
<br>
</blockquote></div><br><br clear="all"><br>-- <br><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div><div><div>Eric J. Montemayor, Ph.D.<br></div>Associate Scientist<br></div>University of Wisconsin-Madison<br></div><span>145 Biochemistry Laboratories<br>
433 Babcock Drive<br>
Madison, WI 53706</span><br>512.784.5981<br><span><span><a href="http://about.me/montemayor" target="_blank">http://about.me/montemayor</a></span></span><br><a href="https://www.linkedin.com/pub/eric-montemayor/63/121/98b" target="_blank">https://www.linkedin.com/in/ericmontemayor</a><br></div></div></div></div></div></div></div></div></div></div></div>
</div>