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Joshua,<br>
<br>
You can coerce Coot to auto-open your mtz if you add to your
~/.coot-preferences/phenix.py file:<br>
<br>
set_auto_read_column_labels("F", "PHIF")<br>
<br>
Paul.<br>
<br>
On 03/08/17 20:57, Pavel Afonine wrote:<br>
</div>
<blockquote cite="mid:3eee1fed-d63a-35a9-1644-d32fd1bcd8d6@lbl.gov"
type="cite">
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Auto-open-MTZ is to load MTZ file assuming it contains Fourier map
coefficients with labels that Coot recognizes automatically as
appropriate map coefficients. In case of other labels (such as you
get from phenix.map_to_structure_factors) you need to use "Open
MTZ,.." and then specify what array you want to load.<br>
<br>
Now it helps to understand that mrc file contains actual
real-space map, not Fourier map coefficients. To load that map
into Coot you need to use "Open map".<br>
<br>
Pavel <br>
<br>
<div class="moz-cite-prefix">On 8/3/17 08:34, Joshua Jude Lobo
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:CALSq1U_aLqOJzW+bTK7te0vf1ynn9uWV4N0_vueXy3BFTjMuZg@mail.gmail.com">
<div dir="ltr">
<div dir="auto">Hi Paul
<div dir="auto"><br>
</div>
<div dir="auto">Thank you for your reply . I was using
Auto-open-MTZ option in the drop-down for opening my map
and it was failing to show up. However ,the Open MTZ
option correctly read my MTZ file and displayed it. </div>
<div dir="auto"><br>
</div>
<div>Thank you for your help . The python function to
generate the histogram was very helpful .</div>
<div><br>
</div>
<div>Sincerely</div>
<div>Joshua Lobo </div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On Aug 2, 2017 13:59, "Paul Emsley"
<<a href="mailto:pemsley@mrc-lmb.cam.ac.uk"
target="_blank" moz-do-not-send="true">pemsley@mrc-lmb.cam.ac.uk</a>>
wrote:<br type="attribution">
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">On
02/08/17 19:57, Paul Emsley wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex"> <br>
Calculate -> Scripting -><br>
</blockquote>
<br>
Calculate -> Scripting -> Python<br>
<br>
:-/<br>
<br>
<br>
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