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The error message says that PDB file contains unknown/nonstandard
residues or ligands. This needs to be addressed before proceeding to
refinement. If you indeed have some unknowns in the model then you
need to provide a proper CIF file with restraints, or resolve the
conflict otherwise.<br>
<br>
Pavel<br>
<br>
<div class="moz-cite-prefix">On 9/18/17 17:57, Jiemin Zhao wrote:<br>
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<p>Hi,</p>
<p><br>
</p>
<p>I got an error message when I try to refine a molecular
replacement result. It says Fatal problems interpreting model
file: Number of atoms with unknown nonbonding energy type
symbols: 18 Please edit the model file to resolve the problems
and/or supply a CIF file with matching restraint definitions,
along with apply-cif-modification and apply-cif-link parameter
definitions if necessary.</p>
<p>Could you help me with this problem?</p>
<p>Thanks!<br>
</p>
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