<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
</head>
<body text="#000000" bgcolor="#FFFFFF">
Hi Wei,<br>
<br>
cutting out a box with model and map around it may be a solution for
your case. A tool for this is phenix.map_box or its GUI equivalent.<br>
<br>
Pavel<br>
<br>
P.S.: phenix.real_space_refine does this internally so 'irrelevant'
box size never affects runtime of refinement.<br>
<br>
<br>
<div class="moz-cite-prefix">On 12/28/18 23:14, <a class="moz-txt-link-abbreviated" href="mailto:dancingdream@163.com">dancingdream@163.com</a>
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:3cff69db.8eac.167f8d069cd.Coremail.dancingdream@163.com">
<meta http-equiv="content-type" content="text/html; charset=UTF-8">
<div
style="line-height:1.7;color:#000000;font-size:14px;font-family:Arial">
<div><span style="font-size: 18px;">Dear all,</span></div>
<div><span style="font-size: 18px;">The cell parameter of the EM
map is always too large, which will make the model building
program running very slow.</span></div>
<div><span style="font-size: 18px;">But in factor, the structure
is a smal part of cell. So can I smaller the cell parameter
when I use <span style="font-size: 18px; font-family:
Menlo;">phenix.map_to_structure_factors to convert the EM
map to </span></span><font face="Menlo" size="4"><span
style="font-size: 18px;">mtz file.</span></font></div>
<div><font face="Menlo" size="4"><span style="font-size: 18px;">Thank
a lot!</span></font></div>
<div><font face="Menlo" size="4"><br>
</font></div>
<div><font face="Menlo" size="4">Wei</font></div>
<div><br>
</div>
<div><br>
</div>
</div>
<br>
<br>
<span title="neteasefooter">
<p> </p>
</span><br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<br>
<pre wrap="">_______________________________________________
phenixbb mailing list
<a class="moz-txt-link-abbreviated" href="mailto:phenixbb@phenix-online.org">phenixbb@phenix-online.org</a>
<a class="moz-txt-link-freetext" href="http://phenix-online.org/mailman/listinfo/phenixbb">http://phenix-online.org/mailman/listinfo/phenixbb</a>
Unsubscribe: <a class="moz-txt-link-abbreviated" href="mailto:phenixbb-leave@phenix-online.org">phenixbb-leave@phenix-online.org</a></pre>
</blockquote>
<br>
</body>
</html>