<div dir="ltr">Hi Guenter,<div><br></div><div>What version of python do you use? The error is saying that the "argparse" module is not available, but it should be available on the default system python for CentOS 6 (python 2.6.x).</div><div></div><div><br clear="all"><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div><div>--</div><div><span style="font-size:12.8000001907349px">Billy K. Poon</span><br></div></div><div>Research Scientist, Molecular Biophysics and Integrated Bioimaging</div><div>Lawrence Berkeley National Laboratory</div><div>1 Cyclotron Road, M/S 33R0345</div><div>Berkeley, CA 94720</div><div>Tel: (510) 486-5709</div><div>Fax: (510) 486-5909</div><div>Web: <a href="https://phenix-online.org" target="_blank">https://phenix-online.org</a></div></div></div></div></div></div></div></div></div></div></div></div></div></div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Feb 12, 2019 at 7:17 AM Guenter Fritz <<a href="mailto:guenter.fritz.phenix.ccp4@gmail.com">guenter.fritz.phenix.ccp4@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-style:solid;border-left-color:rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF">
<p><font size="+1">Dear phenix developers,</font></p>
<p><font size="+1">I get errors trying to install latest builds from
1.14.3405, 3406, 3409 64bit centos6 on Scientific Linux
machines still running 6.6 (kernel 2.6.32). </font><br>
<font size="+1"><font size="+1">1.14.3395 installed without any
problem. </font></font></p>
<p><font size="+1"><font size="+1">The downloaded file is OK.
1.14.3409 64bit centos6 installed on Ubuntu 18.04 without any
problem. </font></font></p>
<p><font size="+1">I also tried to install from source but got the
same error output (see below). I googeled some error outputs -
looks like some python error. Do I have to update finally?<br>
</font></p>
<p><font size="+1">Best regards, <br>
</font></p>
<p><font size="+1">Guenter</font></p>
<p><font size="+1"><br>
</font></p>
<p><font size="+1">Output trying to install from source:</font></p>
<p><font size="-2" face="Courier New">[guenter@msm68
phenix-installer-dev-3409-source]$ ./install
--prefix=/home/software/PHENIX/1.14.3409/ --nproc=10<br>
Traceback (most recent call last):<br>
File "./bin/install.py", line 20, in <module><br>
from libtbx.auto_build import install_distribution<br>
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_distribution.py",
line 75, in <module><br>
from libtbx.auto_build import install_base_packages<br>
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_base_packages.py",
line 28, in <module><br>
from .package_defs import *<br>
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/package_defs.py",
line 18, in <module><br>
from .bootstrap import Toolbox<br>
File
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/bootstrap.py",
line 14, in <module><br>
import argparse<br>
ImportError: No module named argparse</font><font size="+1"><br>
<br>
</font></p>
<p><font size="+1">Similar from an installer:</font></p>
<p><font face="Courier New">[guenter@msm68
phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6]$
./install --prefix=/home/software/PHENIX/1.14.3405/ <br>
Traceback (most recent call last):<br>
File "./bin/install.py", line 20, in <module><br>
from libtbx.auto_build import install_distribution<br>
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py",
line 75, in <module><br>
from libtbx.auto_build import install_base_packages<br>
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_base_packages.py",
line 28, in <module><br>
from .package_defs import *<br>
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/package_defs.py",
line 18, in <module><br>
from .bootstrap import Toolbox<br>
File
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/bootstrap.py",
line 14, in <module><br>
import argparse<br>
ImportError: No module named argparse</font><font size="+1"><br>
<br>
</font></p>
<p><font size="+1"><br>
</font></p>
</div>
_______________________________________________<br>
phenixbb mailing list<br>
<a href="mailto:phenixbb@phenix-online.org" target="_blank">phenixbb@phenix-online.org</a><br>
<a href="http://phenix-online.org/mailman/listinfo/phenixbb" rel="noreferrer" target="_blank">http://phenix-online.org/mailman/listinfo/phenixbb</a><br>
Unsubscribe: <a href="mailto:phenixbb-leave@phenix-online.org" target="_blank">phenixbb-leave@phenix-online.org</a></blockquote></div>