<div dir="ltr"><div dir="ltr">Hi Pavel,<div><br></div><div> Did you find time to modify <span class="gmail-il">phenix</span>.validation_cryoem ?</div><div><br></div><div> thanks for the help</div><div><br></div><div> Roberto</div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, Mar 6, 2019 at 3:47 PM Pavel Afonine <<a href="mailto:pafonine@lbl.gov">pafonine@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Hi Roberto,<br>
<br>
I don't think we have it. I will double-check now. If we don't have it I <br>
will add it today so that it's available in tomorrow's build.<br>
<br>
Pavel<br>
<br>
On 3/6/19 06:25, Roberto Marabini wrote:<br>
> Hi,<br>
><br>
> I see that it is possible to execute phenix.validation from <br>
> command line by typing:<br>
><br>
> phenix.validation_cryoem <path to>/5ni1.cif <path to>/molprobity.mrc <br>
> resolution=2.2<br>
><br>
> The program runs smoothly and prints on screen a few hundreds of lines.<br>
> The more or less equivalent program in version 1.13 was <br>
> phenix.molprobity, when executed with the option pickle=True, <br>
> phenix.molprobity saved to the hard-disk a pkl file containing all data.<br>
><br>
> Is there an equivalent flag for phenix.validation_cryoem? where is the <br>
> result of executing this shell being saved?<br>
><br>
> thanks<br>
><br>
> Roberto<br>
<br>
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