<div dir="ltr">Thanks you ;-)</div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Apr 9, 2019 at 12:19 AM Billy Poon <<a href="mailto:BKPoon@lbl.gov">BKPoon@lbl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi Roberto,<div><br></div><div>I checked in basic functionality so that adding "pickle=True" to the command line will dump the same results object that the GUI uses for displaying the data. The filename is currently hard-coded as "validation_cryoem.pkl" and that file will be overwritten without warning, but I'll be adding more functionality to make it more user friendly.</div><div><br></div><div>The feature will be available in the next build that will be released this week.</div><div><br clear="all"><div><div dir="ltr" class="gmail-m_-1306306985545040231gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div><div>--</div><div><span style="font-size:12.8px">Billy K. Poon</span><br></div></div><div>Research Scientist, Molecular Biophysics and Integrated Bioimaging</div><div>Lawrence Berkeley National Laboratory</div><div>1 Cyclotron Road, M/S 33R0345</div><div>Berkeley, CA 94720</div><div>Tel: (510) 486-5709</div><div>Fax: (510) 486-5909</div><div>Web: <a href="https://phenix-online.org" target="_blank">https://phenix-online.org</a></div></div></div></div></div></div></div></div></div></div></div></div></div></div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Apr 8, 2019 at 7:22 AM Roberto Marabini <<a href="mailto:roberto@cnb.csic.es" target="_blank">roberto@cnb.csic.es</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div><br></div><div>Hi,</div><div><br></div><div dir="ltr"> I see that in phenix 1.14 (and 1.15) the command phenix.molprobity has been replaced by the more general phenix.validation_cryoem. In the old version (1.13) phenix.molprobity, when executed with the option pickle=True, saved to the hard-disk a pkl file containing all data.<div><br></div><div>Is there an equivalent flag for phenix.validation_cryoem? I asked this question a month ago and I understood from the answer that the option was not available but that you plan to incorporate it. Did you find time modify <span class="gmail-m_-1306306985545040231gmail-m_-1518685274481971268gmail-m_8564157112523414046gmail-il">phenix</span>.validation_cryoem ?</div><div><br></div><div> thanks</div><div><br></div><div> Roberto</div></div><div><div class="gmail_quote">
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