<div dir="ltr">Kay<div><br></div><div>I would upgrade to Rosetta 3.10 and Phenix 1.15.2 and retry.</div><div><br clear="all"><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div dir="ltr">Cheers<div><br></div><div>Nigel<div><br></div><div>---</div><div>Nigel W. Moriarty<br>Building 33R0349, Molecular Biophysics and Integrated Bioimaging</div><div>Lawrence Berkeley National Laboratory<br>Berkeley, CA 94720-8235<br>Phone : 510-486-5709 Email : NWMoriarty@LBL.gov<br>Fax : 510-486-5909 Web : <a href="http://CCI.LBL.gov" target="_blank">CCI.LBL.gov</a></div></div></div></div></div></div></div></div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, May 8, 2019 at 9:08 AM Perry, Kay H. <<a href="mailto:kperry@anl.gov">kperry@anl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
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<div>I am having a problem with mr_rosetta where I cannot make it past the rebuild step. I have made fragment files using the old Robetta Server and I am using a hhpred alignment file, but even if I try with a model_already_placed when I reach rebuilding,
I get the following error.<br>
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protocols.looprelax: ===<br>
protocols.looprelax: === Remodel <br>
protocols.looprelax: ===<br>
<br>
ERROR: frag_libs().size() > 0<br>
ERROR:: Exit from: src/protocols/comparative_modeling/LoopRelaxMover.cc line: 47<br>
7<br>
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<p style="margin-top:0px;margin-bottom:0px"> My PHENIX_ROSETTA_PATH is pointed at <span>
/share/apps/necat/programs/rosetta3.4</span> so I believe I am using version 3.4 of rosetta.<br>
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<div style="font-family:Tahoma;font-size:13px"><font size="2" face="Helvetica"><span style="font-size:10pt">Kay Perry<br>
NE-CAT<br>
9700 S. Cass Ave.<br>
Bldg. 436 E007<br>
Argonne, IL 60439<br>
630-252-0692</span></font></div>
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