<div dir="ltr">Hi Ahmad,<div><br></div><div>The message says that you have unknown ligands and need to supply information about them. There is a tool ReadySet under "Refinement" category to generate this information. I'll send the outcome of this tool off-list. Supply these files along with the model and everything should work. Let us know if you have any questions.</div><div><br></div><div>Best regards,</div><div>Oleg Sobolev. </div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Thu, Jul 11, 2019 at 9:51 AM Ahmad Khalifa <<a href="mailto:underoath006@gmail.com">underoath006@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hello,<br><div><br></div><div>I have a fatal error with my model regarding a number of atoms with unknown nonbonded energy type symbol! </div><div><br></div><div>I attached a screenshot of the error and my pdb, can you please help me debug the problem?</div><div><br></div><div>Best regards. </div><div><br></div><div><br></div><div><br></div></div>
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