<div dir="ltr">Ahmed<div><br></div><div>Can you upgrade to the latest version? and see if the bug repeats?</div><div><br clear="all"><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div dir="ltr">Cheers<div><br></div><div>Nigel<div><br></div><div>---</div><div>Nigel W. Moriarty<br>Building 33R0349, Molecular Biophysics and Integrated Bioimaging</div><div>Lawrence Berkeley National Laboratory<br>Berkeley, CA 94720-8235<br>Phone : 510-486-5709 Email : NWMoriarty@LBL.gov<br>Fax : 510-486-5909 Web : <a href="http://CCI.LBL.gov" target="_blank">CCI.LBL.gov</a></div></div></div></div></div></div></div></div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Jan 14, 2020 at 9:27 AM ahmed <<a href="mailto:bio25210@yahoo.fr">bio25210@yahoo.fr</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><div style="font-family:"Helvetica Neue",Helvetica,Arial,sans-serif;font-size:13px"><div dir="ltr">Dear Phenix community,</div><div dir="ltr"><br></div><div dir="ltr">I was wondering whether you experienced previously this problem. I'm running the 1.17.1-3600 version under ubuntu 16. when I do refinment and try to add ions an error message appear : <br></div><div dir="ltr"><br></div><div dir="ltr">out = cStringIO.StringIO()</div><div dir="ltr">NameError: global name 'cStringIO' is not defined</div><div dir="ltr">CAUGHT EXCEPTION: (argument #559)</div><div dir="ltr">ARGUMENT LEADING TO EXCEPTION: 6099</div><div dir="ltr">Traceback (most recent cell last):</div><div dir="ltr">File "usr/local/phenix-1.17.1-3600/modules/cctbx_project/libtbx/easy_mp.py", line 181, in_call_result = 0.func(arg)</div><div dir="ltr"><span>File "usr/local/phenix-1.17.1-3600/modules/cctbx_project/libtbx/ions/identify.py", line 1435, in_call_out = cStringIO.StringIO()</span></div><div dir="ltr"><span></span><span><div dir="ltr">NameError: global name 'cStringIO' is not defined</div></span><div><br></div><div dir="ltr">Thanks for your help.</div><div dir="ltr"><br></div><div dir="ltr">Regards</div><div dir="ltr">Ahmed<br></div></div></div></div>_______________________________________________<br>
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