<html><head></head><body><div class="yahoo-style-wrap" style="font-family:Helvetica Neue, Helvetica, Arial, sans-serif;font-size:13px;"><div dir="ltr" data-setdir="false"><div><div>Dear All,<br><br>I have tried to install Rosetta for phenix use
based on the guide in
https://www.phenix-online.org/documentation/reference/rosetta_install.html.<br><br>After
the "tar xzf..." command, I added the directory for the installed
rosetta (something like "export
PHENIX_ROSETTA_PATH=/your-path-to-rosetta-here/") to my .bashrc (and in
fact I also have added into /bash_profile) and sourced it.<br><br>For
the final step to build the interface for rosetta_refine, as for my gcc
version is 8.3.1, I have deleted the original site.settings in the
directory ${PHENIX_ROSETTA_PATH}/main/source/tools/build/, and exactly
copied the content in
https://www.phenix-online.org/documentation/extras/site.settings and
save it as site.settings in the directory
${PHENIX_ROSETTA_PATH}/main/source/tools/build/.<br><br>Command "nproc"
displays 12, then I run "rosetta.build_phenix_interface nproc=12". In
the running step for the above command, I remember it asked me "whether
to install "sed" (I do not what is "sed" for), I answer "y" and "enter",
it seems like the computer stopped. I opened another terminal, and all
commands like "ls","cd" failed to work.<br><br>I restarted the computer, but I cannot log into my centos username account anymore.<br><br>I
restarted the computer by initiating the centos secure start system,
and deleted the export directory for the rosetta from the .bashrc and
.bash_profile. In this way I restarted the computer and I can log into
my centos user name account as usual. But as you know, my rosetta still
did not work.<br><br>Thus, will you please advice what is wrong for my installation fof the rosetta (for phenix use) and how to make it workable?<br><br>I am looking forward to getting your reply.<br><br>Best wishes,<br><br>Smith</div><div><br></div><br><br></div><div><br></div></div></div></body></html>