<div dir="ltr">User name: Robert Munoz<br>  E-mail address: <a href="mailto:robertm@lbl.gov">robertm@lbl.gov</a><br>  Version: 1.18.2-3874<br>  Platform: mac-intel-osx-x86_64<br>  Comments: Trying to refinement using locscale out map<br><br>  Traceback:<br>RuntimeError : cctbx Internal Error: /Users/builder/slave/phenix-nightly-mac-intel-osx-x86_64/modules/cctbx_project/cctbx/maptbx/resolution.h(38): CCTBX_ASSERT(sum_all != 0.) failure.<br>Traceback:<br>  File &quot;/Applications/phenix-1.18.2-3874/modules/cctbx_project/libtbx/runtime_utils.py&quot;, line 181, in run<br>    return_value = self.target()<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/cctbx_project/libtbx/runtime_utils.py&quot;, line 76, in __call__<br>    result = self.run()<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 908, in run<br>    self.result = run(args=self.args, validated=True, log=sys.stdout)<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 581, in __init__<br>    self.caller(func = self.initialize,       prefix=&quot;Initialize&quot;)<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 619, in caller<br>    status = func(prefix=prefix, **kwargs)<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 696, in initialize<br>    self.inputs = self.process_inputs()<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 675, in process_inputs<br>    return process_inputs_stage_1(process_inputs_stage_0_object=pis_0, log=self.log)<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/phenix/phenix/command_line/real_space_refine.py&quot;, line 403, in process_inputs_stage_1<br>    crystal_symmetry = model.crystal_symmetry()).result.d99<br><br>  File &quot;/Applications/phenix-1.18.2-3874/modules/cctbx_project/cctbx/maptbx/__init__.py&quot;, line 117, in __init__<br>    d_max      = self.d_max)<br><br><br><br>  Platform info:<br>  __FILE__ = /Users/builder/slave/phenix-nightly-mac-intel-osx-x86_64/modules/cctbx_project/boost_adaptbx/meta_ext.cpp<br>__DATE__ = May 17 2020<br>__TIME__ = 22:35:27<br>__TIMESTAMP__ = Thu Feb 27 10:57:04 2020<br>__x86_64__<br>__APPLE_CC__ = 6000<br>__GNUC__ = 4<br>__GNUC_MINOR__ = 2<br>__GNUC_PATCHLEVEL__ = 1<br>__clang__<br>__clang_major__ = 11<br>__clang_minor__ = 0<br>__clang_patchlevel__ = 0<br>__clang_version__ = 11.0.0 (clang-1100.0.33.17)<br>__llvm__<br>__GXX_WEAK__ = 1<br>__LP64__ = 1<br>__VERSION__ = 4.2.1 Compatible Apple LLVM 11.0.0 (clang-1100.0.33.17)<br>FE_INEXACT = 32<br>FE_DIVBYZERO = 4<br>FE_UNDERFLOW = 16<br>FE_OVERFLOW = 8<br>FE_INVALID = 1<br>FE_ALL_EXCEPT = 63<br>__SSE2__ = 1<br>BOOST_LIB_VERSION = 1_63<br>PY_VERSION = 2.7.15<br>PYTHON_API_VERSION = 1013<br>sizeof(bool) = 1<br>sizeof(short) = 2<br>sizeof(int) = 4<br>sizeof(long) = 8<br>sizeof(std::size_t) = 8<br>sizeof(void*) = 8<br>sizeof(long long) = 8<br>sizeof(float) = 4<br>sizeof(double) = 8<br>sizeof(long double) = 16<br>sizeof(boost::int32_t) = 4<br>sizeof(boost::uint32_t) = 4<br>sizeof(wchar_t) = 4<br>__PTRDIFF_TYPE__<br>Py_USING_UNICODE<br>sizeof(PY_UNICODE_TYPE) = 2<br>BOOST_ADAPTBX_TYPE_ID_SIZE_T_EQ_UNSIGNED_LONG<br>boost/TAG: None<br><a href="http://os.name/" rel="noreferrer" target="_blank">os.name</a>: posix<br>sys.platform: darwin<br>sys.byteorder: little<br>platform.platform(): Darwin-17.7.0-x86_64-i386-64bit<br>platform.architecture(): (&#39;64bit&#39;, &#39;&#39;)<br>floating_point_exceptions.division_by_zero_trapped: False<br>floating_point_exceptions.invalid_trapped: False<br>floating_point_exceptions.overflow_trapped: False<br>number of processors: 4<br>Memory total:  17,179,869,184<br>Memory free:          unknown<br>import thread: OK<br>&quot;hello&quot; = [&#39;h&#39;, &#39;e&#39;, &#39;l&#39;, &#39;l&#39;, &#39;o&#39;]<br>u&quot;hello&quot; = [&#39;h&#39;, &#39;\x00&#39;, &#39;e&#39;, &#39;\x00&#39;, &#39;l&#39;, &#39;\x00&#39;, &#39;l&#39;, &#39;\x00&#39;, &#39;o&#39;, &#39;\x00&#39;]<br>u&quot;\u00C5&quot; = [&#39;\xc5&#39;, &#39;\x00&#39;] as utf-8 = [&#39;\xc3&#39;, &#39;\x85&#39;]<br>LATIN CAPITAL LETTER A WITH RING ABOVE = Å<div class="gmail-yj6qo"></div><div class="gmail-adL"><br></div></div>