Sorry, this should have gone onto cctbx list.

This is running bootstrap.py --builder=dials build on MacOS X, but I don’t think it is specific to dials.

 

-Markus

 

From: Gerstel, Markus (DLSLtd,RAL,LSCI)
Sent: 22 January 2016 08:51
To: [email protected]
Subject: Mac builds currently broken on Jenkins

 

During the build step this happens:

 

 

(..)

/usr/bin/c++ -o annlib_adaptbx/self_include/bd_fix_rad_search.o -c -DBOOST_ALL_NO_LIB -fPIC -fno-strict-aliasing -Wno-c++0x-extensions -Wno-array-bounds -DNDEBUG -O3 -ffast-math -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/src -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/annlib_adaptbx/include annlib_adaptbx/self_include/bd_fix_rad_search.cpp

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/ann/ann_adaptor.cpp:3:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/include/annlib_adaptbx/ann_adaptor.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/flex_types.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/accessors/flex_grid.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/small.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/small_plain.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/tiny.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/tiny_plain.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/detail/misc.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/type_traits.h:29:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits.hpp:13:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/add_const.hpp:16:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/detail/type_trait_def.hpp:14:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/detail/template_arity_spec.hpp:10:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/int.hpp:17:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/int_fwd.hpp:17:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/aux_/adl_barrier.hpp:17:

/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/aux_/config/adl.hpp:17:10: fatal error: 'boost/mpl/aux_/config/msvc.hpp' file not found

#include <boost/mpl/aux_/config/msvc.hpp>

         ^

/usr/bin/c++ -o annlib_adaptbx/self_include/bd_pr_search.o -c -DBOOST_ALL_NO_LIB -fPIC -fno-strict-aliasing -Wno-c++0x-extensions -Wno-array-bounds -DNDEBUG -O3 -ffast-math -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/src -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/annlib_adaptbx/include annlib_adaptbx/self_include/bd_pr_search.cpp

/usr/bin/c++ -o annlib_adaptbx/self_include/bd_search.o -c -DBOOST_ALL_NO_LIB -fPIC -fno-strict-aliasing -Wno-c++0x-extensions -Wno-array-bounds -DNDEBUG -O3 -ffast-math -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/src -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/include -I/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/build/annlib_adaptbx/include annlib_adaptbx/self_include/bd_search.cpp

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/ann/boost_python/annlib_ext.cpp:2:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/annlib_adaptbx/include/annlib_adaptbx/ann_adaptor.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/flex_types.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/accessors/flex_grid.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/small.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/small_plain.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/tiny.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/tiny_plain.h:5:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/detail/misc.h:4:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/cctbx_project/scitbx/array_family/type_traits.h:29:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits.hpp:13:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/add_const.hpp:16:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/detail/type_trait_def.hpp:14:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/type_traits/detail/template_arity_spec.hpp:10:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/int.hpp:17:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/int_fwd.hpp:17:

In file included from /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/aux_/adl_barrier.hpp:17:

/Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules/boost/boost/mpl/aux_/config/adl.hpp:17:10: fatal error: 'boost/mpl/aux_/config/msvc.hpp' file not found

#include <boost/mpl/aux_/config/msvc.hpp>

         ^

1 error generated.

scons: *** [annlib_adaptbx/ann/ann_adaptor.o] Error 1

1 error generated.

scons: *** [annlib_adaptbx/ann/boost_python/annlib_ext.o] Error 1

scons: building terminated because of errors.

usr+sys time: 3.36 seconds, ticks: 13399823, micro-seconds/tick: 0.251

wall clock time: 15.72 seconds

Performing actions: build

===== Running in .: deleting dist, tests, tmp

 

  removing .pyc files in /Users/dlshudson/jenkins_slave/workspace/dials_package_macosx/build_dials/modules

  removed 3 files

===== Running in build: run configure.py

===== Running in build: save configure command

===== Running in build: libtbx.scons

Process failed with return code 2

Build step 'Execute shell' marked build as failure

 

 

-Markus

 

 

-- 

This e-mail and any attachments may contain confidential, copyright and or privileged material, and are for the use of the intended addressee only. If you are not the intended addressee or an authorised recipient of the addressee please notify us of receipt by returning the e-mail and do not use, copy, retain, distribute or disclose the information in or attached to the e-mail.
Any opinions expressed within this e-mail are those of the individual and not necessarily of Diamond Light Source Ltd.
Diamond Light Source Ltd. cannot guarantee that this e-mail or any attachments are free from viruses and we cannot accept liability for any damage which you may sustain as a result of software viruses which may be transmitted in or with the message.
Diamond Light Source Limited (company no. 4375679). Registered in England and Wales with its registered office at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom