Hi,
Are you installing phenix from source or from a binary distribution? And
which operating system are you using? I can give you the flags (in addition
to the --prefix flag for installing into the base directory) for the
configure step for either OS X or Linux.
You can basically install Phenix normally, and then recompile our Python
from scratch with our regular flags and your extra flag.
--
Billy K. Poon
Research Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 33R0345
Berkeley, CA 94720
Tel: (510) 486-5709
Fax: (510) 486-5909
Web: https://phenix-online.org
On Wed, Feb 3, 2016 at 3:05 AM, acyang
Hi everyone
I've installed pymol and phenix on my scientific linux7.1 workstation. I can launch pymol via the launching script($PYMOL_HOME/pymol) normally. But when I launched pymol in phenix GUI, I got some error as followed:
********************************************************************************************************************************* Traceback (most recent call last): File "/opt/PyMOL/modules/pymol/__init__.py", line 71, in <module> import pymol File "/opt/PyMOL/modules/pymol/__init__.py", line 521, in <module> import pymol._cmd ImportError: /opt/PyMOL/modules/pymol/_cmd.so: undefined symbol: PyUnicodeUCS4_SetDefaultEncoding
********************************************************************************************************************************* After STFW*, *I knew the problem is about unicode variant (UCS2, UCS4). I also checked the configuration of two python. For /bin/python (adopted by pymol)
import sys>>> print sys.maxunicode1114111
And for $PHENIX_HOME/base/bin/python (adopted by phenix)
import sys print sys.maxunicode 65535
My question is : How do I add the flag --enable-unicode=ucs4 in configuring Python-2.7.8_cci.
I'd appreciate if any reply on this.
acyang
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