On Thu, Jul 8, 2010 at 9:10 AM,  <span dir="ltr">&lt;<a href="mailto:alexander.singer@utoronto.ca">alexander.singer@utoronto.ca</a>&gt;</span> wrote:<br><div class="gmail_quote"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
Hi -- I installed phenix-installer-1.6-289-intel-linux-2.6.tar on my Fedora Core 5 linux partition and most things run -- but not solve (which I was first trying from autosolve).  As recommened by the documentation, when I type phenix.solve, here&#39;s what I have ---<br>

<br>
[root@ausinger oth32_c]# phenix.solve<br>
binary=/usr/local/phenix-1.6-289/build/intel-linux-2.6/solve_resolve/exe/solve<br>
SOLVEDIR=/usr/local/phenix-1.6-289/solve_resolve/ext_ref_files<br>
SYMOP=/usr/local/phenix-1.6-289/solve_resolve/ext_ref_files/symop.lib<br>
SYMINFO=/usr/local/phenix-1.6-289/solve_resolve/ext_ref_files/syminfo.lib<br>
CCP4_OPEN=UNKNOWN<br>
SOLVE_RESOLVE_MALLOC_MAX=1862380800<br>
<br>
/usr/local/phenix-1.6-289/build/intel-linux-2.6/solve_resolve/exe/solve: error w hile loading shared libraries: /usr/local/phenix-1.6-289/build/intel-linux-2.6/l ib/libimf.so: cannot restore segment prot after reloc: Permission denied<br>
</blockquote><div><br></div><div>This is a conflict with the SE (&quot;Security Enhanced&quot;, or some such nonsense) Linux extensions.  If you turn these off, SOLVE will run.  I don&#39;t know the exact instructions, but if you Google for the phrase &quot;cannot restore segment prot after reloc: Permission denied&quot;, you&#39;ll find plenty of links.  I think this problem will go away in another couple of weeks.</div>
<div><br></div><div>PS. Please update to version 1.6.2.</div><div><br></div><div>-Nat</div></div>