Dear Venkat,

Could you try this with the latest nightly build?  We've just fixed a bug in the anisotropy correction in Phaser (which is the part where the error was triggered).  The bug crept in sometime in August and was just fixed on Friday.

If this doesn't fix the problem, then perhaps you could send me the data (offline) and I could try to reproduce the problem.

Best wishes,

Randy Read

On 28 Sep 2009, at 18:04, r n wrote:

Hi all

I have come across a new error while running the phenix.automr as follows, it works
fine untill last week? Not sure what causes this error.

:Output&, TNT::Vector<double>, double, TNT::Vector<double>, TNT::Vector<double>&, double, double, double, bool&, bool&)+0x1bf0) [0x2aaab34594b0]
  /home/pgm/phenix-installer-1.4-147/phenix-1.4-147/build/intel-linux-2.6-x86_64/lib/phaser_ext.so(phaser::Minimizer::ShiftScore(double, phaser::RefineBase&, TNT::Vector<double>&, TNT::Vector<double>&, TNT::Vector<double>&, phaser::Output*, bool)+0x45) [0x2aaab3457845]
  /home/pgm/phenix-installer-1.4-147/phenix-1.4-147/build/intel-linux-2.6-x86_64/lib/phaser_ext.so(phaser::RefineANO::targetFn()+0x1a4) [0x2aaab34d9054]
  /lib64/libc.so.6 [0x3e6c830070]
Floating-point error (Python and libc call stacks above)
                This crash may be due to a problem in any imported
                Python module, including modules which are not part
                of the cctbx project. To disable the traps leading
                to this message, define these environment variables
                (e.g. assign the value 1):
                    BOOST_ADAPTBX_FPE_DEFAULT
                    BOOST_ADAPTBX_SIGNALS_DEFAULT
                This will NOT solve the problem, just mask it, but
                may allow you to proceed in case it is not critical.

any help?

Thanks

venkat

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Randy J. Read
Department of Haematology, University of Cambridge
Cambridge Institute for Medical Research      Tel: + 44 1223 336500
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