Re: [phenixbb] Making GDP (non-polymer) into an RNA monomer

Hi Francis,

However, what's the etiquette for how the residue should be named in the PDB? I have it right now as GDP, though Gr seems much more sensible? Or should I name it something completely custom?

If the monomer library GDP matches what you have in the PDB I'd stick with the name. I'd rename the residue only if modifications are necessary. Gr would be a problematic alternative because the monomer library uses that already for RNA Guanosine (mon_lib/g/GR.cif). Ralf