On Mon, Dec 3, 2012 at 8:45 PM, So Jay
I was using generate table 1 utility in phenix-1.8.1-1168. The data was processed with HKL2000 and model was refined using Autobuster.
In the table I find two entries for Multiplicity and R-sym were blank. I was wondering if there is any particular reason for this.
In 1.8.1, the program can't calculate multiplicity and R-sym on its own, only extract these from logfiles. Did you supply the scaling logfile from HKL2000? The important one is what accompanies your .sca file (same name but ending in .log). If you did include this, it's quite possible that the logfile parser breaks somewhere, in which case I'd be interested in seeing the file. That said, I would recommend updating to the latest nightly build, because the program has been improved significantly, partly just bug fixes but also the ability to calculate merging statistics directly if you also supply unmerged data (e.g. obtained using the "no merge original index" macro for scaling in HKL2000, or output automatically if you run xia2). This is so much cleaner than parsing logfiles that the latter feature will probably disappear eventually - it's just too difficult to support over the long term. -Nat