We installed latest phenix and latest rosetta last week. I ran test script: phenix_regression.wizards.test_command_line_rosetta_quick_tests and got the test failing at the prerefine because of missing shared libraries, as shown below in the FAQ (italics).

I tried again in both bash & csh after setting or exporting the environment variables shown below, but got the same exact error. If I do printenv the shell sees the new env var.

What should I try next?

THanks so much

Laurie Betts & CD Poon
University of North Carolina

Why does mr_rosetta bomb and say "error while loading shared libraries: libdevel.so: cannot open shared object file: No such file or directory ?

This may indicate that somewhere your system is defining the shared libraries that Rosetta needs, and these are for a place that is not where Rosetta expects them to be. You can try to ignore the previous definitions this way: If you are using the bash or sh shells:

export PHENIX_TRUST_OTHER_ENV=1

or csh (C-shell):

setenv PHENIX_TRUST_OTHER_ENV 1

in the script where you run mr_rosetta, or before you run it from the command line.