Hello All,

I have a non-Phenix problem- finding shape complementarity!

I tried running the script for sc (ccp4) but it doesn’t run to completion to give me the sc number.

It stops saying “imaginary contain”. What does that mean?

However there is no error as such. I gave it the pdb that I got after my phenix refinement.

Is there something I should be doing first to the pdb after refinement before running sc on it?

Here is the script and I am also attaching the pdb.

sc XYZIN F7-2_refine_113.pdb <<eof-sc

MOLECULE 1

CHAIN A

CHAIN B

MOLECULE 2

CHAIN C

eof-sc

Thanks in advance!!

Sneha

From: Randy Read [mailto:[email protected]]
Sent: Tuesday, April 21, 2015 3:42 AM
To: Sneha Rangarajan
Subject: Re: [phenixbb] citation

Dear Sneha,

Here's a link to the publication (which is open access):

http://scripts.iucr.org/cgi-bin/paper?ba5210.

Best wishes,

Randy Read

On 20 Apr 2015, at 19:02, Sneha Rangarajan <[email protected]> wrote:

Hello,

What is the correct way to cite Phenix MRage?

Thanks,

Sneha

_______________________________________________
phenixbb mailing list
[email protected]
http://phenix-online.org/mailman/listinfo/phenixbb
Unsubscribe: [email protected]

------

Randy J. Read

Department of Haematology, University of Cambridge

Cambridge Institute for Medical Research      Tel: + 44 1223 336500

Wellcome Trust/MRC Building                   Fax: + 44 1223 336827

Hills Road                                    E-mail: [email protected]

Cambridge CB2 0XY, U.K.                       www-structmed.cimr.cam.ac.uk