Dear Huanwang,

1. I noticed the option main.ncs=True is no longer supported in the latest version (1.10.1-2155). Is it true that this option will be replaced by ncs_search.enabled=True from now on?
Yes, this is just rearrangement of options. The underlying functionality is (almost) the same.
 
2. I noticed the phenix.ready_set can add hydrogens to waters. How are the hydrogens added to the O atoms? by the H-bonding direction? How accurate is it if the density is not observable?
Hopefully somebody else is more knowledgeable about this question.

Best regards,
Oleg Sobolev.
 

Thanks you so much in advance.


Regards,
Huanwang
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