On Fri, Apr 23, 2010 at 1:31 PM, Francis E Reyes <Francis.Reyes@colorado.edu> wrote:
I'm getting an error refining with TaBr. Got tbr_exp.pdb from Hic-Up and prepared the cif with phenix.elbow.

Try to do a refine with the pdb and cif and I get this error.

Sorry: Conflicting scattering type symbols:
 initial symbol: "TA" (from pdb element column)
     new symbol: "T" (with residue name TBR)
 atom:
   "HETATM 1917 TA1  TBR B7131 .*.    TA  "

The idealized coordinates from HIC-UP (tbr_msd.pdb) have the element type specified (which the experimental coordinates do not).  Would adding that column help?  (You'd probably need to re-run elbow once you have the corrected file, not jump directly to refinement.)

-Nat