P.S.: Let Phenix Autobuild rebuild the model and see what it places there. I guess Autobuild has a model building mode such that it builds whatever fits best even if that is not what's in the sequence file. Check manual to make sure you use that mode.

Pavel

On 1/1/12 5:11 PM, Dialing Pretty wrote:
Dear All,
 
Attached is a part of electronic density pap I assigned to Pro. After Phenix refinement, we can see under the Pro ring there is a rather large green, above the Pro ring there is a part of red.
 
Do you think whether I assign the Pro correctly?
 
I am looking forward to getting your reply.
 
Cheers,
 
Dialing


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