Hi Tom,

don't we need to add "maps_only=True" as well (as Manual suggests in section "Just make maps; don't do any building."; http://www.phenix-online.org/documentation/autobuild.htm) ?

I'm asking because the original question was specific about it: compute map and "nothing extra".

Thanks,
Pavel.

On 10/13/2008 2:17 PM, Thomas C. Terwilliger wrote: 
Hi Vladimir,
You can do this with:

phenix.autobuild data=data.mtz model=coords.pdb
composite_omit_type=sa_omit nproc=4

All the best,
Tom T


  
After phenix.refine stage I would like to get just the sa_omit map for the
whole assymetric unit (nothing extra). How can I do it?
 Regards.
Vladimir



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