21 Apr
2010
21 Apr
'10
8:59 p.m.
4. If I just run phenix.refine executable from its directory, it stops with en error: File "c:\cci_apps_sources\mmtbx\secondary_structure.py", line 941, in run_ksdssp_direct raise RuntimeError, "KSDSSP not available" RuntimeError: KSDSSP not available
This is my fault. I'd recommend using the latest nightly build (the ones I released are relatively stable).
Thanks, that [almost] did it. setpaths.bat now runs without an error but evidently still does not set any paths. (At least none new is shown when I use SET command to display them). If, however, I provide path to phenix.refine.exe explicitly, it seems to run fine. If, say, I only use phenix.refine.exe, do I need to manually set any other paths besides this executable? Dima