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8 Apr
2011
8 Apr
'11
9:47 a.m.
On Fri, Apr 8, 2011 at 9:21 AM, Panne Daniel
I am having problems with the secondary structure restraints in phenix.refine (1.6.4-486). I wrote a ss restraints file and use this as an input file. In the log file I can see that the file is read but the atom selections used by phenix.refine do not correspond to those set in the restraints file.
Could you please send me (off-list) the file containing the SS restraints, and the log file from your run? I suspect there is a syntax problem, but it's hard to guess without seeing the output. FYI, I've fixed a lot of bugs in this code recently, so I'd recommend upgrading to the latest nightly build. -Nat