Benoit

If you only have one instance of GDP in your model you have copy the GDP from the monomer library and use REEL to add a torsion that forces the C3' endo.

If more that one you have to change the code and create a new restraint file.

I'm happy to help if you send me the files.

Cheers

Nigel

NB. Any files sent to me will be held in strictest confidence.

On Thu, Feb 6, 2014 at 12:33 PM, Benoît Masquida <b.masquida@unistra.fr> wrote:

Hello everyone,

Does someone know how to define the sugar pucker in eLBOW? I am trying to force a C3' endo conformation for GDP.

Thanks for your help.

Benoit

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Benoît Masquida
Chargé de Recherche CNRS
GMGM, UMR 7156 GMGM
tel: +33 3 68 85 14 81
fax: +33 3 68 85 13 65
IPCB, 21, rue René Descartes
67084 Strasbourg
b.masquida@unistra.fr

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Nigel W. Moriarty
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