Hi,

I was wondering if the geometry regularization in phenix.pdbtools can be applied to selected residues only.
Something like:
> phenix.pdbtools my.pdb selection="resname xyz" --geometry-regularization

Many thanks in advance,

Oliv

--
Oliv Eidam, Ph.D.
Postdoctoral fellow

University of California, San Francisco
Dept. of Pharmaceutical Chemistry
1700 4th Street, Byers Hall North, Room 501
San Francisco, CA 94158 - Box 2550

Phone: 415-514-4253
Fax : 415-514-4260
Email: eidamo@blur.compbio.ucsf.edu