I'm sorry for the trouble! Can you first check to make sure you have a recent version of phenix (i.e., in the last few months). There was an earlier version that sometimes had this problem but I think that it should not be happening now. If not, can you download a current nightly build (take one from a few days ago to be safe) and try again?

Tom T

Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel: 505-667-0072 email: [email protected]
Fax: 505-665-3024 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB

CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss

On May 20, 2009, at 11:51 AM, Katya Heldwein wrote:

Hi, I am trying to run Autobuild to generate a very good rebuilt model using

phenix.autobuild data=data.mtz model=coords.pdb multiple_models=True \
include_input_model=True \
multiple_models_number=1 n_cycle_rebuild_max=5

with some modifications.

When I run it, I get the following error:

********************************************************************************
Failed to carry out AutoBuild_multiple_models:

[Errno 2] No such file or directory: 'AutoBuild_run_1_/TEMP0/temporary.com'
********************************************************************************

How can I troubleshoot this problem?

Katya

--
Ekaterina Heldwein, Ph.D.
Assistant Professor
Department of Molecular Biology and Microbiology
Tufts University 136 Harrison Ave
Boston, MA 02111

phone: 617-636-0858
fax: 617-636-0337
e-mail: [email protected]

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