If you set weight=0 it will not use the map, though in this case it is more rational to use phenix.geometry_minimization.

More information:

https://www.phenix-online.org/documentation/reference/real_space_refine.html

Pavel

On 5/12/15 7:54 PM, Smith Liu wrote:

Dear All,

For minimization_global of phenix.real_space_refine, does it has relationship with the input map, or it is only processed based on the input pdb?

Smith
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