Cheers

Nigel

---

Nigel W. Moriarty
Building 64R0246B, Physical Biosciences Division
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709 Email : NWMoriarty@LBL.gov
Fax : 510-486-5909 Web : CCI.LBL.gov

On Tue, Jan 20, 2015 at 3:58 AM, Roger Dodd <roger.dodd@gmail.com> wrote:

Hi all,

I've been using the carbo_load tool to add in GlcNAc residues to Asn side chains and have noticed that in recent nightlies there is a bug that throws up the following error message (this occurs even if carbo_load is just run in "mode 1"):

Traceback (most recent call last):
File "/Applications/phenix-dev-1924/build/../modules/elbow/elbow/command_line/carbo_load.py", line 705, in <module>
run(args)
File "/Applications/phenix-dev-1924/build/../modules/elbow/elbow/command_line/carbo_load.py", line 417, in run
from elbow.saccharide import carbohydrate_classes
File "/Applications/phenix-dev-1924/modules/elbow/elbow/saccharide/carbohydrate_classes.py", line 28, in <module>
from phenix.ligands.DensityBlobsClassConnectivity import DensityBlobsClassConnectivity
ImportError: No module named DensityBlobsClassConnectivity

I get this with dev-1894 and dev-1924 but not the last stable 1.9-1692.

Cheers,

Roger

--
Roger B. Dodd, PhD
Cambridge Institute for Medical Research
University of Cambridge School of Clinical Medicine
Wellcome Trust/MRC Building
Cambridge Biomedical Campus
Hills Road
Cambridge
CB2 0XY

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