Hi Smith,
all data files that are used in tutorials are shipped with Phenix. So you don't need to download anything additionally. If you want to use your own data, just do it and follow the tutorial script. In this case your files have the same property as in the tutorial (for example, have symmetry if it is used as part of the tutorial).
Hope this helps!
Pavel
Dear All,
For "Tutorial: Solving a structure with cryo-EM data using docking", it is easy to download the emd_20026_half_map_1_box.ccp4 and emd_20026_half_map_2_box.ccp4 from the emd-20026 depositation, but will you please let me know step by step how to get the tutorial used seq.dat, 20026_auto_sharpen_A.ccp4 (any other name for this file? Cannot find the exact name fileĀ in emd_20026 depositation), apoferritin_chainA_rsr.pdb (it mentioned "model refined against sharpened map", which sharpened map, and what was the refinement method ued?), run_denmod_dock.csh?
I am looking forward to getting your reply.
Best wishes,
Smith