Hi Chen,

yes:

phenix.b_factor_statistics model.pdb
or
phenix.pdbtools model.pdb model_stat=true

It will take case of TLS etc appropriately.

Pavel

On 10/4/14 1:03 PM, Chen Zhao wrote:

Dear all,

I am just wondering whether there is a command line tool in phenix that calculates the average B-factor of a PDB file? Can it deal with the ANISOU records (from TLS refinement or not) properly? I looked into previous posts but the  --show-adp-statistics option in phenix.pdbtools seems to be no longer available in the version (1.9-1678) I installed.

Thank you so much,

Chen

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