Hi,
I'm also trying to use rosetta with a protein that has more than 650 aminoacids. I have found the answer on last June to the similar question about the fragment files but I couldn't make the script to change the aminoacids numbers work so far http://www.phenix-online.org/pipermail/phenixbb/2011-June/017268.html
However I think the script got out of format and I can't make it work. I have python installed however I'm a total beginner on python.
Is it possible that I could have the scrip file so I don't lose the
Hi again David,
Sorry, corrected command below.
Can you try the version of the script I put in phenix:
phenix.adjust_robetta_resid fragments_in fragments_adjusted
Also, should I replace something inside (like put the file name somewhere) so it works?
Thanks in advance
David Neves Institut de Biologie Structurale Grenoble France